Benjamin K Johnson

10PUBLICATIONS

112CO-AUTHORS

Genomics and transcriptomicsChemical engineering designGene expression (incl. microarray and other genome-wide approaches)Sequence analysisChemical and thermal processes in energy and combustion

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Publications (10)

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|Jun 30, 2026

Tranquillyzer: A Neural Network Framework for Long-read Annotation and Demultiplexing.

|Apr 22, 2026

Ciliated Cells Drive Critical STING-Mediated Tumor Suppression in the Fallopian Tube Epithelium.

|Nov 19, 2025

A Pangenomic Method for Establishing a Somatic Variant Detection Resource in HapMap Mixtures.

Nahyun Kong, Zitian Tang, Andrew Ruttenberg

|Aug 06, 2025

Tranquillyzer: A Flexible Neural Network Framework for Structural Annotation and Demultiplexing of Long-Read Transcriptomes.

Ayush Semwal, Jacob Morrison, Ian Beddows

|Jun 12, 2025

Synthbar: A Lightweight Tool for Adding Synthetic Barcodes to Sequencing Reads.

Jacob Morrison, Benjamin K Johnson, Hui Shen

|Jun 06, 2025

Efficient profiling of total RNA in single cells with STORM-seq.

Benjamin K Johnson, Mary F Majewski, H Josh Jang

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Frequent Collaborators

Hui Shen

Jacob Morrison

Ayush Semwal

Ian Beddows

H Josh Jang

Kathleen R Cho

Ronny Drapkin

Timothy J Triche

David G Huntsman

Ting Wang

Frequent Collaborators

Hui Shen

Jacob Morrison

Ayush Semwal

Ian Beddows