Trey Ideker

55PUBLICATIONS
499CO-AUTHORS
Epigenetics (incl. genome methylation and epigenomics)Predictive and prognostic markersGene expression (incl. microarray and other genome-wide approaches)Genomics and transcriptomicsGene mapping
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Publications (55)

|Jul 01, 2026
A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells.

|Jun 02, 2026
DREAM repressive activity links somatic mutation, lifespan and disease.

|May 26, 2026
A foundation model of cancer genotype enables precise predictions of therapeutic response.

|Mar 27, 2026
Common and rare genetic variants show network convergence for a majority of human traits.

Sarah N Wright, Jane Yang, Trey Ideker

|Feb 04, 2026
scLong: a billion-parameter foundation model for capturing long-range gene context in single-cell transcriptomics.

Ding Bai, Shentong Mo, Ruiyi Zhang

|Oct 02, 2025
Publisher Correction: Multimodal cell maps as a foundation for structural and functional genomics.

Leah V Schaffer, Mengzhou Hu, Gege Qian

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Frequent Collaborators

11 joint publications

Nevan Krogan

9 joint publications

Dexter Pratt

8 joint publications

Jason F Kreisberg

7 joint publications

Danielle L Swaney