Trey Ideker

57PUBLICATIONS
522CO-AUTHORS
Gene mappingEpigenetics (incl. genome methylation and epigenomics)Predictive and prognostic markersGene expression (incl. microarray and other genome-wide approaches)Genomics and transcriptomics
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (57)

|Aug 27, 2026
Autism mutations rewire protein interaction networks to drive neurodevelopmental pathology.

|Jul 01, 2026
A genome-scale CRISPRi perturbation atlas of human induced pluripotent stem cells.

|Jun 02, 2026
DREAM repressive activity links somatic mutation, lifespan and disease.

|May 26, 2026
A foundation model of cancer genotype enables precise predictions of therapeutic response.

|Mar 27, 2026
Common and rare genetic variants show network convergence for a majority of human traits.

Sarah N Wright, Jane Yang, Trey Ideker

|Feb 04, 2026
scLong: a billion-parameter foundation model for capturing long-range gene context in single-cell transcriptomics.

Ding Bai, Shentong Mo, Ruiyi Zhang

Pageof 10

Frequent Collaborators

12 joint publications

Nevan Krogan

10 joint publications

Dexter Pratt

8 joint publications

Jason F Kreisberg

8 joint publications

Danielle L Swaney