Katherine Siddle

15PUBLICATIONS
313CO-AUTHORS
Medical infection agents (incl. prions)Graph, social and multimedia dataMedical virologyComputational linguisticsEpidemiological methods
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Publications (15)

|May 04, 2026
Oral and plasma microbiome in the context of acute febrile illness.

|Apr 16, 2025
Geospatial and demographic patterns of SARS-CoV-2 spread in Massachusetts from over 130,000 genomes.

Gage K Moreno, Taylor Brock-Fisher, Lydia A Krasilnikova

|Dec 14, 2024
Polyphonia: detecting inter-sample contamination in viral genomic sequencing data.

Lydia A Krasilnikova, Christopher H Tomkins-Tinch, Alton C Gayton

|Feb 07, 2024
Genome-wide association study identifies human genetic variants associated with fatal outcome from Lassa fever.

Dylan Kotliar, Siddharth Raju, Shervin Tabrizi

|Jan 25, 2024
Investigating the etiologies of non-malarial febrile illness in Senegal using metagenomic sequencing.

Zoë C Levine, Aita Sene, Winnie Mkandawire

|Aug 04, 2023
Metagenomic surveillance uncovers diverse and novel viral taxa in febrile patients from Nigeria.

Judith U Oguzie, Brittany A Petros, Paul E Oluniyi

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Frequent Collaborators

13 joint publications

Pardis C Sabeti

10 joint publications

Stephen F Schaffner

10 joint publications

Danny Park

7 joint publications

Bronwyn McInnis