Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Alan E Murphy

10PUBLICATIONS
49CO-AUTHORS
Panel data analysisGene expression (incl. microarray and other genome-wide approaches)Deep learningEpigenetics (incl. genome methylation and epigenomics)Programming languages
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (10)

Sort by Publication Date:
|Jun 09, 2026
Genome-wide meta-analysis of quantitatively measured generalized anxiety symptoms in individuals of European ancestry.

|Apr 08, 2026
Predicting non-coding variant effects with AlphaGenome.

Alan E Murphy, Masayuki Nagai, Peter K Koo

|Dec 11, 2024
Predicting gene expression from histone marks using chromatin deep learning models depends on histone mark function, regulatory distance and cellular states.

Alan E Murphy, Aydan Askarova, Boris Lenhard

|Nov 16, 2024
Predicting cell type-specific epigenomic profiles accounting for distal genetic effects.

Alan E Murphy, William Beardall, Marek Rei

|Jan 03, 2024
rworkflows: automating reproducible practices for the R community.

Brian M Schilder, Alan E Murphy, Nathan G Skene

|Dec 04, 2023
Avoiding false discoveries in single-cell RNA-seq by revisiting the first Alzheimer's disease dataset.

Alan E Murphy, Nurun Fancy, Nathan Skene

Pageof 2

Frequent Collaborators

4 joint publications

Nathan Skene

3 joint publications

Brian M Schilder

1 joint publications

Azizia Wahedi

1 joint publications

Shamima Rahman

1 joint publications

Sera Choi

1 joint publications

Nurun Fancy

1 joint publications

Boris Lenhard

1 joint publications

Peter K Koo

1 joint publications

Megan Skelton

1 joint publications

Brittany L Mitchell

Frequent Collaborators

4 joint publications

Nathan Skene

3 joint publications

Brian M Schilder

1 joint publications

Azizia Wahedi

1 joint publications

Shamima Rahman