Alan E Murphy

11PUBLICATIONS
50CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Panel data analysisDeep learningEpigenetics (incl. genome methylation and epigenomics)Programming languages
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (11)

|Jul 27, 2026
Toward generalizable and interpretable AI in regulatory genomics.

|Jun 09, 2026
Genome-wide meta-analysis of quantitatively measured generalized anxiety symptoms in individuals of European ancestry.

|Dec 11, 2024
Predicting gene expression from histone marks using chromatin deep learning models depends on histone mark function, regulatory distance and cellular states.

Alan E Murphy, Aydan Askarova, Boris Lenhard

|Nov 16, 2024
Predicting cell type-specific epigenomic profiles accounting for distal genetic effects.

Alan E Murphy, William Beardall, Marek Rei

|Jan 03, 2024
rworkflows: automating reproducible practices for the R community.

Brian M Schilder, Alan E Murphy, Nathan G Skene

|Dec 04, 2023
Avoiding false discoveries in single-cell RNA-seq by revisiting the first Alzheimer's disease dataset.

Alan E Murphy, Nurun Fancy, Nathan Skene

Pageof 2

Frequent Collaborators

4 joint publications

Nathan Skene

3 joint publications

Brian M Schilder

2 joint publications

Peter K Koo

1 joint publications

Azizia Wahedi