John Quackenbush

54PUBLICATIONS
163CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Life historiesNeural networksChild and adolescent developmentHuman information interaction and retrieval
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (54)

|Aug 01, 2026
FERRET: Framework to Evaluate Robustness in Regulatory Networks Using Heterogeneous Cell Types.

|Jul 29, 2026
Large-scale, interpretable gene regulatory network inference through biologically informed matrix factorization.

|Jul 03, 2026
LOESS and DE-SWAN can induce artifactual "waves" of molecular aging.

|Jul 03, 2026
PARROT: Phase-Altering Regulatory Rewiring Over Time.

|Jun 12, 2026
Genomic, Transcriptomic, and Regulomic Analyses Do Not Support Profound Autism as a Distinct Biological Category.

|Jun 11, 2026
Deploying a JupyterHub Server for Academic Research Using Netbooks as an Example.

Pageof 9

Frequent Collaborators

16 joint publications

Marouen Ben Guebila

12 joint publications

Enakshi Saha

11 joint publications

Viola Fanfani

11 joint publications

Katherine Hoff Shutta