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Eitan Yaffe

5PUBLICATIONS
13CO-AUTHORS
Microbial geneticsBacteriologyMedical bacteriologyMicrobial taxonomyCell and nuclear division
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Journal

Publications (5)

Sort by Publication Date:
|Jun 04, 2026
Path-dependent recovery of the gut microbiome after antibiotics emerges from coupled ecological and evolutionary dynamics.

|Apr 24, 2025
Brief antibiotic use drives human gut bacteria towards low-cost resistance.

Eitan Yaffe, Les Dethlefsen, Arati V Patankar

|Apr 13, 2022
Precise genotyping of circular mobile elements from metagenomic data uncovers human-associated plasmids with recent common ancestors.

Nitan Shalon, David A Relman, Eitan Yaffe

|Dec 25, 2019
Tracking microbial evolution in the human gut using Hi-C reveals extensive horizontal gene transfer, persistence and adaptation.

Eitan Yaffe, David A Relman

|Nov 06, 2015
Single-cell Hi-C for genome-wide detection of chromatin interactions that occur simultaneously in a single cell.

Takashi Nagano, Yaniv Lubling, Eitan Yaffe

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Frequent Collaborators

3 joint publications

David A Relman

1 joint publications

Yaniv Lubling

1 joint publications

Les Dethlefsen

1 joint publications

Susan Holmes

1 joint publications

Chinmay Lalgudi

1 joint publications

Masakazu Kotaka

1 joint publications

Jamie A Lopez

1 joint publications

Feiqiao Brian Yu

1 joint publications

Katharine Ng

1 joint publications

Justin L Sonnenburg

Frequent Collaborators

3 joint publications

David A Relman

1 joint publications

Yaniv Lubling

1 joint publications

Les Dethlefsen

1 joint publications

Susan Holmes