Zhen Li

6PUBLICATIONS

14CO-AUTHORS

Gene expression (incl. microarray and other genome-wide approaches)Artificial life and complex adaptive systemsGenome structure and regulationEpigenetics (incl. genome methylation and epigenomics)

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Publications (6)

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|May 11, 2026

Cross-modality representation and multi-sample integration of spatially resolved omics data.

|Dec 15, 2025

hECA v2.0: an AI-ready ensemble cell atlas of single-cell RNA and ATAC sequencing data.

Xi Xi, Yixin Chen, Xinze Wu

|Nov 26, 2025

Human-scATAC-Corpus: a comprehensive database of scATAC-seq data.

Xiaoyang Chen, Zijing Gao, Keyi Li

|Sep 25, 2025

EpiAgent: foundation model for single-cell epigenomics.

Xiaoyang Chen, Keyi Li, Xuejian Cui

|May 17, 2025

CREATE: cell-type-specific cis-regulatory element identification via discrete embedding.

Xuejian Cui, Qijin Yin, Zijing Gao

|Feb 01, 2025

INSTINCT: Multi-sample integration of spatial chromatin accessibility sequencing data via stochastic domain translation.

Yuyao Liu, Zhen Li, Xiaoyang Chen

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Frequent Collaborators

Rui Jiang

Xiaoyang Chen

Zijing Gao

Xuejian Cui

Hairong Lv

Shengquan Chen

Yuyao Liu

Qiao Liu

Keyi Li

Xi Xi

Frequent Collaborators

Rui Jiang

Xiaoyang Chen

Zijing Gao

Xuejian Cui