Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Marcel Ramos

12PUBLICATIONS
83CO-AUTHORS
Microbial geneticsSoftware architectureData mining and knowledge discoveryGene expression (incl. microarray and other genome-wide approaches)Translational and applied bioinformatics
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (12)

Sort by Publication Date:
|Dec 23, 2025
Meta-analysis of 22,710 human microbiome metagenomes defines an oral-to-gut microbial enrichment score and associations with host health and disease.

Paolo Manghi, Giacomo Antonello, Lucas Schiffer

|Dec 03, 2025
Orchestrating Spatial Transcriptomics Analysis with Bioconductor.

Helena L Crowell, Yixing Dong, Ilaria Billato

|Aug 08, 2025
Bioconductor's Computational Ecosystem for Genomic Data Science in Cancer.

Marcel Ramos, Lori Shepherd, Nathan C Sheffield

|May 21, 2025
<i>bamSliceR</i>: a Bioconductor package for rapid, cross-cohort variant and allelic bias analysis.

Yizhou Peter Huang, Lauren Harmon, Eve Deering-Gardner

|Apr 22, 2025
Learning and teaching biological data science in the Bioconductor community.

Jenny Drnevich, Frederick J Tan, Fabricio Almeida-Silva

|Nov 25, 2024
lefser: implementation of metagenomic biomarker discovery tool, LEfSe, in R.

Asya Khleborodova, Samuel D Gamboa-Tuz, Marcel Ramos

Pageof 2

Frequent Collaborators

7 joint publications

Levi Waldron

6 joint publications

Sehyun Oh

5 joint publications

Sean Davis

4 joint publications

Martin Morgan

4 joint publications

Vincent J Carey

3 joint publications

Ludwig Geistlinger

3 joint publications

Lucas Schiffer

2 joint publications

Dario Righelli

2 joint publications

Yizhou Peter Huang

2 joint publications

Laurent Gatto

Frequent Collaborators

7 joint publications

Levi Waldron

6 joint publications

Sehyun Oh

5 joint publications

Sean Davis

4 joint publications

Martin Morgan

Top Related Videos

Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems
06:58

Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems

Published on : Aug 23, 2019

7.4K
Mining Spatial Transcriptomics Datasets using DeepSpaceDB
10:16

Mining Spatial Transcriptomics Datasets using DeepSpaceDB

Published on : Sep 05, 2025

624
Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
07:41

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

Published on : May 17, 2019

9.1K
See more related videos

Top Related Videos

Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems
06:58

Analysis of Interactions between Endobiotics and Human Gut Microbiota Using In Vitro Bath Fermentation Systems

Published on : Aug 23, 2019

7.4K
Mining Spatial Transcriptomics Datasets using DeepSpaceDB
10:16

Mining Spatial Transcriptomics Datasets using DeepSpaceDB

Published on : Sep 05, 2025

624
Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases
07:41

Performing Data Mining And Integrative Analysis Of Biomarker in Breast Cancer Using Multiple Publicly Accessible Databases

Published on : May 17, 2019

9.1K
See more related videos