Nathan Raabe

10PUBLICATIONS
23CO-AUTHORS
Medical bacteriologySurface water quality processes and contaminated sediment assessmentGene mappingEpigenetics (incl. genome methylation and epigenomics)Genomics and transcriptomics
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Publications (10)

|Jun 04, 2026
Genomic epidemiology and transmission dynamics of plasmids carrying New Delhi metallo-β-lactamase ( bla NDM ) at a single hospital system over five years.

|May 27, 2026
Genomic Epidemiology of Antibiotic-Resistant Bacteria Sampled from Metropolitan Wastewater.

|Apr 27, 2026
Whole genome sequencing to study SARS-CoV-2 transmission between university students and the surrounding community in Pittsburgh, Pennsylvania, 2020-2021.

|Nov 24, 2025
ACCIO: An Assembly-Based Tool Enabling Plasmid Detection.

Nathan J Raabe, Marissa P Griffith, Vatsala Rangachar Srinivasa

|Nov 24, 2025
Whole Genome Sequencing to Study SARS-CoV-2 Transmission between University Students and the Surrounding Community in Pittsburgh, Pennsylvania, 2020-2021.

Vatsala Rangachar Srinivasa, Marissa P Griffith, Kathleen A Shutt

|Nov 24, 2025
Methods for cost-efficient, whole genome sequencing surveillance for enhanced detection of outbreaks in a hospital setting.

Kady D Waggle, Marissa Pacey Griffith, Alecia B Rokes

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Frequent Collaborators

7 joint publications

Daria Van Tyne

6 joint publications

Graham M Snyder

6 joint publications

Lee H Harrison

6 joint publications

Alexander Sundermann