Faramarz Valafar

10PUBLICATIONS
12CO-AUTHORS
Epigenetics (incl. genome methylation and epigenomics)Medical mycologyBiological adaptationPhylogeny and comparative analysisMedical infection agents (incl. prions)
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Publications (10)

|Dec 17, 2025
Updated Erdman reveals tandem repeat copy number is phase-variable and impacts M. tuberculosis adaptation across evolutionary timescales.

Samuel J Modlin, Nachiket Thosar, Paulina M Mejía-Ponce

|Nov 19, 2025
Intercellular mosaic methylation in fast-growing Mycobacterium tuberculosis clinical isolates.

Maryam Ahmadi Jeshvaghane, Samuel J Modlin, Derek Conkle-Gutierrez

|Apr 22, 2025
Interred mechanisms of resistance and host immune evasion revealed through network-connectivity analysis of M. tuberculosis complex graph pangenome.

Monica E Espinoza, Ashley M Swing, Afif Elghraoui

|Jan 13, 2023
Evaluating impacts of syntenic block detection strategies on rearrangement phylogeny using Mycobacterium tuberculosis isolates.

Afif Elghraoui, Siavash Mirarab, Krister M Swenson

|May 09, 2022
Distribution of Common and Rare Genetic Markers of Second-Line-Injectable-Drug Resistance in Mycobacterium tuberculosis Revealed by a Genome-Wide Association Study.

Derek Conkle-Gutierrez, Calvin Kim, Sarah M Ramirez-Busby

|Feb 01, 2022
Pyrazinamide Susceptibility Is Driven by Activation of the SigE-Dependent Cell Envelope Stress Response in Mycobacterium tuberculosis.

Joshua M Thiede, Nicholas A Dillon, Michael D Howe

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Frequent Collaborators

5 joint publications

Samuel J Modlin

2 joint publications

Afif Elghraoui

2 joint publications

Nicholas A Dillon

2 joint publications

Anthony D Baughn