Shaoqiang Zhang

10PUBLICATIONS
3CO-AUTHORS
Genomics and transcriptomicsGenome structure and regulationGene expression (incl. microarray and other genome-wide approaches)Sequence analysisHuman information behaviour
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Publications (10)

|Jul 30, 2026
Navigating cell maps by deep learning integration of single-cell and spatially resolved transcriptomics.

|Mar 26, 2025
Enhancing Single-Cell and Bulk Hi-C Data Using a Generative Transformer Model.

Ruoying Gao, Thomas N Ferraro, Liang Chen

|Mar 10, 2025
Inferring gene regulatory networks from time-series scRNA-seq data via GRANGER causal recurrent autoencoders.

Liang Chen, Madison Dautle, Ruoying Gao

|Jul 27, 2024
DeepIMAGER: Deeply Analyzing Gene Regulatory Networks from scRNA-seq Data.

Xiguo Zhou, Jingyi Pan, Liang Chen

|Sep 28, 2023
Self-supervised deep clustering of single-cell RNA-seq data to hierarchically detect rare cell populations.

Tianyuan Lei, Ruoyu Chen, Shaoqiang Zhang

|Sep 09, 2023
scTIGER: A Deep-Learning Method for Inferring Gene Regulatory Networks from Case versus Control scRNA-seq Datasets.

Madison Dautle, Shaoqiang Zhang, Yong Chen

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Frequent Collaborators

9 joint publications

Yong Chen

1 joint publications

Benjamin R Carone

1 joint publications

Thomas N Ferraro