Rui Liu

22PUBLICATIONS
19CO-AUTHORS
Cancer diagnosisPredictive and prognostic markersCancer geneticsData structures and algorithmsComputational logic and formal languages
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Publications (22)

|Jul 20, 2026
scTIDE: Deciphering Critical Transitions Through Cell-Perturbed Manifold Graphs and Optimal Transport Conditional Flow Matching.

|Jul 17, 2026
HNPP: Higher-order network-based personalized PageRank for detecting critical phase in complex biological systems.

|Jun 18, 2026
sMIE: revealing critical transitions in complex biological systems using single-sample mutual information entropy.

|Jun 01, 2026
Self-supervised reservoir computing with spatial-temporal encoding for identifying critical transitions.

|Oct 29, 2025
Hi-C3: a statistical inference-based model for reconstructing higher-order cell-cell communication networks.

Yuyan Tong, Renhao Hong, Meng Li

|Jul 10, 2025
sPGGM: a sample-perturbed Gaussian graphical model for identifying pre-disease stages and signaling molecules of disease progression.

Jiayuan Zhong, Junxian Li, Xuerong Gu

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Frequent Collaborators

9 joint publications

Pei Chen

4 joint publications

Luonan Chen

3 joint publications

Hao Peng

3 joint publications

Yuyan Tong