Jeremy Goecks

13PUBLICATIONS
123CO-AUTHORS
Medical infection agents (incl. prions)Data mining and knowledge discoveryPredictive and prognostic markersSemi- and unsupervised learningMedical molecular engineering of nucleic acids and proteins
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (13)

|Jan 09, 2026
Standardizing RNA-seq Analysis of Fungal Pathogens Using BRC-Analytics and Agentic AI: A Candidozyma auris Case Study.

Anton Nekrutenko, Danielle Callan, Marius Van Den Beek

|Jul 02, 2025
Informatics at the Frontier of Cancer Research.

Kathleen Noller, Taxiarchis Botsis, Pablo G Camara

|Jan 09, 2025
Ongoing replication stress tolerance and clonal T cell responses distinguish liver and lung recurrence and outcomes in pancreatic cancer.

Jason M Link, Jennifer R Eng, Carl Pelz

|Dec 19, 2024
SyntheVAEiser: augmenting traditional machine learning methods with VAE-based gene expression sample generation for improved cancer subtype predictions.

Brian Karlberg, Raphael Kirchgaessner, Jordan Lee

|Feb 21, 2024
Machine Learning Links T-cell Function and Spatial Localization to Neoadjuvant Immunotherapy and Clinical Outcome in Pancreatic Cancer.

Katie E Blise, Shamilene Sivagnanam, Courtney B Betts

|Dec 18, 2023
Imputing Single-Cell Protein Abundance in Multiplex Tissue Imaging.

Raphael Kirchgaessner, Cameron Watson, Allison Creason

Pageof 3

Frequent Collaborators

5 joint publications

Lisa M Coussens

5 joint publications

Allison L Creason

4 joint publications

Shamilene Sivagnanam

2 joint publications

Koei Chin