Paul C Blainey

50PUBLICATIONS
201CO-AUTHORS
Genomics and transcriptomicsGene expression (incl. microarray and other genome-wide approaches)Automated software engineeringInnate immunityDigital processor architectures
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Publications (50)

|May 30, 2026
Brieflow: an integrated computational pipeline for high-throughput analysis of optical pooled screening data.

|May 07, 2026
Stitch-seq: Scalable CRISPR gene expression response profiling.

|Apr 27, 2026
The one-week automated genome-wide optical pooled screen.

|Feb 23, 2026
Accurate strand-specific long-read transcript isoform discovery and quantification at bulk, single-cell, and single-nucleus resolution.

Houlin Yu, Christophe H Georgescu, Akanksha Khorgade

|Dec 03, 2025
A multimodal atlas of COVID-19 severity identifies hallmarks of dysregulated immunity.

Kamil Slowikowski, Pritha Sen, Christopher V Cosgriff

|Sep 22, 2025
Bead-based approaches for increased sensitivity and multiplexing of CRISPR diagnostics.

Sameed M Siddiqui, Nicole L Welch, Tien G Nguyen

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Frequent Collaborators

10 joint publications

Nir Hacohen

5 joint publications

Rebecca J Carlson

5 joint publications

Megan W Tse

4 joint publications

Georgia K Lagoudas