Alexis J Battle

44PUBLICATIONS
359CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Molecular targetsNeural networksEpigenetics (incl. genome methylation and epigenomics)Bioinformatic methods development
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Publications (44)

|Nov 06, 2026
Evaluation design shapes estimates of cross-donor generalization in single-cell classification of cell-type.

|Apr 29, 2026
Trans-eQTLs reveal the architecture of human gene regulatory networks.

|Dec 11, 2025
The Histone Methyltransferase KMT2D Is a Critical Mediator of Lineage Plasticity and Therapeutic Response in Castration-Resistant Prostate Cancer.

Srushti Kittane, Erik Ladewig, Taibo Li

|Dec 08, 2025
Prior knowledge informs graph neural networks to improve phenotype prediction from proteomics.

Prabuddha Ghosh Dastidar, Gus Fridell, Joshua M Popp

|Nov 26, 2025
Functional Genomics Link REST to Endothelial Plasticity and Atherosclerosis.

Maria Viskadourou, Sharjeel Chaudhry, Arianna Scalco

|Nov 18, 2025
A comparison of computational methods for expression forecasting.

Eric Kernfeld, Yunxiao Yang, Joshua S Weinstock

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Frequent Collaborators

5 joint publications

Benjamin Strober

5 joint publications

Joshua Weinstock

5 joint publications

Rebecca Keener

4 joint publications

Diptavo Dutta