Jonathan E Barnes

6PUBLICATIONS
14CO-AUTHORS
Process control and simulationEvolution of developmental systemsMedical molecular engineering of nucleic acids and proteinsChemical thermodynamics and energeticsBioinformatic methods development
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Publications (6)

|Jun 01, 2026
Leveraging Neural Networks to Correct FoldX Free Energy Estimates.

|Feb 11, 2026
Deep-sea fish reveal an alternative developmental trajectory for vertebrate vision.

Lily G Fogg, Stamatina Isari, Jonathan E Barnes

|Jun 03, 2024
Exploring the ability of the MD+FoldX method to predict SARS-CoV-2 antibody escape mutations using large-scale data.

L América Chi, Jonathan E Barnes, Jagdish Suresh Patel

|Feb 26, 2022
Searching for a mechanistic description of pairwise epistasis in protein systems.

Jonathan E Barnes, Craig R Miller, Frederick Marty Ytreberg

|Dec 21, 2020
Assessment of software methods for estimating protein-protein relative binding affinities.

Tawny R Gonzalez, Kyle P Martin, Jonathan E Barnes

|Oct 21, 2020
Short-wavelength-sensitive 2 (Sws2) visual photopigment models combined with atomistic molecular simulations to predict spectral peaks of absorbance.

Dharmeshkumar Patel, Jonathan E Barnes, Wayne I L Davies

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Frequent Collaborators

5 joint publications

Jagdish Suresh Patel

3 joint publications

F Marty Ytreberg

2 joint publications

L América Chi

1 joint publications

Dharmeshkumar Patel