Rachel Colquhoun

13PUBLICATIONS
77CO-AUTHORS
Genomics and transcriptomicsEnvironmental studies in animal productionSequence analysisMedical molecular engineering of nucleic acids and proteinsProgramming languages
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Publications (13)

|Sep 30, 2026
A generalized lineage nomenclature for viral genomic epidemiology.

|Oct 03, 2025
Metagenomics reveals cryptic circulation of zoonotic viruses in Nigeria.

Anise Happi, Ayotunde Sijuwola, Ifeanyi F Omah

|Nov 04, 2024
A phylogenetics and variant calling pipeline to support SARS-CoV-2 genomic epidemiology in the UK.

Rachel Colquhoun, Áine O'Toole, Verity Hill

|Mar 28, 2024
Automated detection and classification of polioviruses from nanopore sequencing reads using piranha.

Áine O'Toole, Rachel Colquhoun, Corey Ansley

|Sep 15, 2023
SCORPIO: a utility for defining and classifying mutation constellations of virus genomes.

Rachel Colquhoun, Ben Jackson, Áine O'Toole

|Jul 20, 2023
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.

Joseph L-H Tsui, John T McCrone, Ben Lambert

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Frequent Collaborators

12 joint publications

Andrew Rambaut

9 joint publications

Áine O'Toole

8 joint publications

Ben Jackson

7 joint publications

John T McCrone