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Simone Marini

17PUBLICATIONS

33CO-AUTHORS

Formal methods for softwareProgramming languagesMedical mycologyDisease surveillanceActive sensing

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Publications (17)

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|Dec 22, 2025

vir2vec: A Viral Genome-Wide Viral Embedding.

Simone Rancati, Pablo Arozarena Donelli, Giovanna Nicora

|Aug 04, 2025

SARITA: a large language model for generating the S1 subunit of the SARS-CoV-2 spike protein.

Simone Rancati, Giovanna Nicora, Laura Bergomi

|Jul 15, 2025

Leveraging large language models to predict antibiotic resistance in Mycobacterium tuberculosis.

Conrad Testagrose, Sakshi Pandey, Mohammadali Serajian

|Jun 25, 2025

Behavioral and Demographic Profiles of HIV Transmission and Exposure Networks in Florida: Network Analysis of HIV Contact Tracing Data.

Yiyang Liu, Christina Parisi, Chaoyue Sun

|Nov 12, 2024

Phylogenetic-informed graph deep learning to classify dynamic transmission clusters in infectious disease epidemics.

Chaoyue Sun, Yanjun Li, Simone Marini

|Oct 24, 2024

Forecasting dominance of SARS-CoV-2 lineages by anomaly detection using deep AutoEncoders.

Simone Rancati, Giovanna Nicora, Mattia Prosperi

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Frequent Collaborators

12 joint publications

Mattia Prosperi

6 joint publications

Marco Salemi

3 joint publications

Riccardo Bellazzi

3 joint publications

Simone Rancati

3 joint publications

Carla Mavian

3 joint publications

Christina Boucher

2 joint publications

Chaoyue Sun

2 joint publications

Noelle Robertson Noyes

1 joint publications

Chase A Pagani

1 joint publications

Massimiliano S Tagliamonte

Frequent Collaborators

12 joint publications

Mattia Prosperi

6 joint publications

Marco Salemi

3 joint publications

Riccardo Bellazzi

3 joint publications

Simone Rancati

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