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James M Ferguson

14PUBLICATIONS

63CO-AUTHORS

Software quality, processes and metricsMicrobial geneticsMicrobial taxonomyNatural language processingFormal methods for software

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Publications (14)

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|Oct 16, 2025

The enduring advantages of the SLOW5 file format for raw nanopore sequencing data.

Hasindu Gamaarachchi, Sasha Jenner, Hiruna Samarakoon

|Sep 03, 2025

Nanopore- and AI-empowered microbial viability inference.

Harika Ürel, Sabrina Benassou, Hanna Marti

|Nov 16, 2024

Repeat-Rich Regions Cause False-Positive Detection of NUMTs: A Case Study in Amphibians Using an Improved Cane Toad Reference Genome.

Kelton Cheung, Lee Ann Rollins, Jillian M Hammond

|Aug 13, 2024

Interactive visualization of nanopore sequencing signal data with Squigualiser.

Hiruna Samarakoon, Kisaru Liyanage, James M Ferguson

|May 01, 2024

Simulation of nanopore sequencing signal data with tunable parameters.

Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon

|Apr 12, 2024

Streamlining remote nanopore data access with slow5curl.

Bonson Wong, James M Ferguson, Jessica Y Do

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Frequent Collaborators

11 joint publications

Ira W Deveson

8 joint publications

Hasindu Gamaarachchi

4 joint publications

Hiruna Samarakoon

4 joint publications

Jillian M Hammond

2 joint publications

Mandeep Singh

2 joint publications

Igor Stevanovski

2 joint publications

Timothy G Amos

1 joint publications

Ghamdan Al-Eryani

1 joint publications

Lara Urban

1 joint publications

Simon Junankar

Frequent Collaborators

11 joint publications

Ira W Deveson

8 joint publications

Hasindu Gamaarachchi

4 joint publications

Hiruna Samarakoon

4 joint publications

Jillian M Hammond

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