James M Ferguson

14PUBLICATIONS
63CO-AUTHORS
Software quality, processes and metricsMicrobial geneticsMicrobial taxonomyNatural language processingFormal methods for software
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Publications (14)

|Oct 16, 2025
The enduring advantages of the SLOW5 file format for raw nanopore sequencing data.

Hasindu Gamaarachchi, Sasha Jenner, Hiruna Samarakoon

|Sep 03, 2025
Nanopore- and AI-empowered microbial viability inference.

Harika Ürel, Sabrina Benassou, Hanna Marti

|Nov 16, 2024
Repeat-Rich Regions Cause False-Positive Detection of NUMTs: A Case Study in Amphibians Using an Improved Cane Toad Reference Genome.

Kelton Cheung, Lee Ann Rollins, Jillian M Hammond

|Aug 13, 2024
Interactive visualization of nanopore sequencing signal data with Squigualiser.

Hiruna Samarakoon, Kisaru Liyanage, James M Ferguson

|May 01, 2024
Simulation of nanopore sequencing signal data with tunable parameters.

Hasindu Gamaarachchi, James M Ferguson, Hiruna Samarakoon

|Apr 12, 2024
Streamlining remote nanopore data access with slow5curl.

Bonson Wong, James M Ferguson, Jessica Y Do

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