Can Firtina
6PUBLICATIONS
18CO-AUTHORS
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Publications (6)
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|Jul 30, 2024
RawHash2: mapping raw nanopore signals using hash-based seeding and adaptive quantization.Can Firtina, Melina Soysal, Joël Lindegger
|Apr 02, 2024
Packaging and containerization of computational methods.Mohammed Alser, Brendan Lawlor, Richard J Abdill
|Feb 16, 2024
RUBICON: a framework for designing efficient deep learning-based genomic basecallers.Gagandeep Singh, Mohammed Alser, Kristof Denolf
|Jun 30, 2023
RawHash: enabling fast and accurate real-time analysis of raw nanopore signals for large genomes.Can Firtina, Nika Mansouri Ghiasi, Joel Lindegger
|Jan 23, 2023
BLEND: a fast, memory-efficient and accurate mechanism to find fuzzy seed matches in genome analysis.Can Firtina, Jisung Park, Mohammed Alser
|Aug 17, 2022
FastRemap: a tool for quickly remapping reads between genome assemblies.Jeremie S Kim, Can Firtina, Meryem Banu Cavlak
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Frequent Collaborators
3 joint publications
Onur Mutlu
2 joint publications
Jeremie S Kim
2 joint publications
Can Alkan
2 joint publications
Joel Lindegger
1 joint publications
Damla Senol Cali
1 joint publications
Nika Mansouri Ghiasi
1 joint publications
Gagandeep Singh
1 joint publications
Meryem Banu Cavlak
1 joint publications
Haiyu Mao
1 joint publications
Mohammed Alser
