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Joshua Rubin

4PUBLICATIONS
8CO-AUTHORS
Phylogeny and comparative analysisMicrobial taxonomyAnthropological genetics
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Publications (4)

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|Dec 12, 2025
SAFARI: pangenome alignment of ancient DNA using purine/pyrimidine encodings.

Joshua Rubin, Jan van Waaij, Louis Kraft

|Oct 17, 2024
SAFARI: Pangenome Alignment of Ancient DNA Using Purine/Pyrimidine Encodings.

Joshua Rubin, Jan van Waaij, Louis Kraft

|Oct 03, 2024
soibean: High-Resolution Taxonomic Identification of Ancient Environmental DNA Using Mitochondrial Pangenome Graphs.

Nicola Alexandra Vogel, Joshua Daniel Rubin, Anders Gorm Pedersen

|Jun 07, 2023
HaploCart: Human mtDNA haplogroup classification using a pangenomic reference graph.

Joshua Daniel Rubin, Nicola Alexandra Vogel, Shyam Gopalakrishnan

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Frequent Collaborators

3 joint publications

Gabriel Renaud

2 joint publications

Louis Kraft

1 joint publications

Nicola Alexandra Vogel

1 joint publications

Anders Gorm Pedersen

1 joint publications

Mikkel Winther Pedersen

1 joint publications

Jan van Waaij

1 joint publications

Jouni Sirén

1 joint publications

Peter Wad Sackett

Frequent Collaborators

3 joint publications

Gabriel Renaud

2 joint publications

Louis Kraft

1 joint publications

Nicola Alexandra Vogel

1 joint publications

Anders Gorm Pedersen

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