Caroline Uhler

26PUBLICATIONS
42CO-AUTHORS
Bioinformatic methods developmentImmunogenetics (incl. genetic immunology)Predictive and prognostic markersDeep learningGene expression (incl. microarray and other genome-wide approaches)
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Publications (26)

|Mar 27, 2026
SpatialFusion: A lightweight multimodal foundation model for pathway-informed spatial niche mapping.

Josephine Yates, Mitra Shavakhi, Toni K Choueiri

|Mar 18, 2026
Detecting chromatin state alterations in PBMCs associated with Type 2 Diabetes Mellitus.

Maryam Moazeni Afarani, Rajshikhar Gupta, Caroline Uhler

|Feb 25, 2026
Partially shared multi-modal embedding learns holistic representation of cell state.

Xinyi Zhang, G V Shivashankar, Caroline Uhler

|Feb 02, 2026
Learning genetic perturbation effects with variational causal inference.

Emily Liu, Jiaqi Zhang, Caroline Uhler

|Aug 20, 2025
Efficiently quantifying dependence in massive scientific datasets using InterDependence Scores.

Adityanarayanan Radhakrishnan, Yajit Jain, Caroline Uhler

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