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Wouter Saelens

8PUBLICATIONS

53CO-AUTHORS

Process control and simulationContext learningPlant and fungus systematics and taxonomySequence analysisGene expression (incl. microarray and other genome-wide approaches)

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Publications (8)

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|Oct 03, 2025

Dissecting the impact of transcription factor dose on cell reprogramming heterogeneity using scTF-seq.

Wangjie Liu, Wouter Saelens, Pernille Rainer

|Jan 02, 2025

ChromatinHD connects single-cell DNA accessibility and conformation to gene expression through scale-adaptive machine learning.

Wouter Saelens, Olga Pushkarev, Bart Deplancke

|Mar 03, 2022

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly.

Hongjie Li, Jasper Janssens, Maxime De Waegeneer

|Jun 21, 2020

A scalable SCENIC workflow for single-cell gene regulatory network analysis.

Bram Van de Sande, Christopher Flerin, Kristofer Davie

|Mar 07, 2020

Trajectory-based differential expression analysis for single-cell sequencing data.

Koen Van den Berge, Hector Roux de Bézieux, Kelly Street

|Dec 11, 2019

NicheNet: modeling intercellular communication by linking ligands to target genes.

Robin Browaeys, Wouter Saelens, Yvan Saeys

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Frequent Collaborators

3 joint publications

Robrecht Cannoodt

3 joint publications

Yvan Saeys

3 joint publications

Bart Deplancke

2 joint publications

Vincent Gardeux

2 joint publications

Kristofer Davie

2 joint publications

Maxime De Waegeneer

2 joint publications

Stein Aerts

1 joint publications

Helena Todorov

1 joint publications

Koen Van den Berge

1 joint publications

Lieven Clement

Frequent Collaborators

3 joint publications

Robrecht Cannoodt

3 joint publications

Yvan Saeys

3 joint publications

Bart Deplancke

2 joint publications

Vincent Gardeux

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