Matthew Ritchie

48PUBLICATIONS
250CO-AUTHORS
Innate immunityMicroelectronicsSequence analysisSoftware quality, processes and metricsGene expression (incl. microarray and other genome-wide approaches)
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Publications (48)

|Aug 14, 2026
Peyer's patch M cells organize an epithelial niche that sustains group 3 innate lymphoid cells and IL-22.

|Mar 23, 2026
Complete genetic and epigenetic architecture of D4Z4 macrosatellites in FSHD, BAMS, and reference cohorts with D4Z4End2End.

Lucinda C Xiao, Ayush Semwal, Brianna St John

|Feb 03, 2026
Alpseq: an open-source workflow to turbocharge nanobody discovery with high-throughput sequencing.

Kathleen Zeglinski, Jakob Schuster, Jaison D Sa

|Nov 24, 2025
stPipe: a flexible and streamlined R/Bioconductor pipeline for preprocessing sequencing-based spatial transcriptomics data.

Yang Xu, Callum J Sargeant, Yue You

|Mar 29, 2025
Benchmarking spatial transcriptomics technologies with the multi-sample SpatialBenchVisium dataset.

Mei R M Du, Changqing Wang, Charity W Law

|Mar 17, 2025
A streamlined workflow for long-read DNA methylation analysis with NanoMethViz and Bioconductor.

Shian Su, Lucinda Xiao, James Lancaster

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Frequent Collaborators

15 joint publications

Quentin Gouil

7 joint publications

Marnie E Blewitt

7 joint publications

Gordon K Smyth

6 joint publications

Luyi Tian