Jian Liu

11PUBLICATIONS
25CO-AUTHORS
Artificial life and complex adaptive systemsProteomics and metabolomicsSoftware quality, processes and metricsGenomics and transcriptomicsDeep learning
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Publications (11)

|May 04, 2026
Improving AlphaFold3 by Engineering MSA and Template Inputs.

|Apr 27, 2026
PreStoi allows accurate prediction of protein complex stoichiometry by integrating AlphaFold3 and template information.

|Aug 14, 2025
Highlights of Model Quality Assessment in CASP16.

Alisia Fadini, Recep Adiyaman, Shaima N Alhaddad

|Aug 13, 2025
Estimating protein complex model accuracy using graph transformers and pairwise similarity graphs.

Jian Liu, Pawan Neupane, Jianlin Cheng

|Jul 15, 2025
Boosting AlphaFold Protein Tertiary Structure Prediction through MSA Engineering and Extensive Model Sampling and Ranking in CASP16.

Jian Liu, Pawan Neupane, Jianlin Cheng

|Jun 02, 2025
Improving AlphaFold2- and AlphaFold3-Based Protein Complex Structure Prediction With MULTICOM4 in CASP16.

Jian Liu, Pawan Neupane, Jianlin Cheng

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Frequent Collaborators

11 joint publications

Jianlin Cheng

7 joint publications

Pawan Neupane

2 joint publications

Alex Morehead

1 joint publications

Nabin Giri