James Shiniti Nagai
9PUBLICATIONS
66CO-AUTHORS
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Publications (9)
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|Oct 23, 2025
PHLOWER leverages single-cell multimodal data to infer complex, multi-branching cell differentiation trajectories.Mingbo Cheng, Jitske Jansen, Katharina C Reimer
|Jun 19, 2025
Advances and challenges in cell-cell communication inference: a comprehensive review of tools, resources, and future directions.Giulia Cesaro, James Shiniti Nagai, Nicolò Gnoato
|Jan 10, 2025
Salmonella infection accelerates postnatal maturation of the intestinal epithelium.Stefan Schlößer, Anna-Lena Ullrich, Nastaran Fazel Modares
|Jan 04, 2024
Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT).Mehdi Joodaki, Mina Shaigan, Victor Parra
|Nov 24, 2023
Mapping cardiac remodeling in chronic kidney disease.Nadine Kaesler, Mingbo Cheng, James Nagai
|Jan 26, 2023
scMEGA: single-cell multi-omic enhancer-based gene regulatory network inference.Zhijian Li, James S Nagai, Christoph Kuppe
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Frequent Collaborators
8 joint publications
Ivan G Costa
6 joint publications
Rafael Kramann
5 joint publications
Christoph Kuppe
3 joint publications
Mingbo Cheng
2 joint publications
Fabian Peisker
2 joint publications
Eric M J Bindels
2 joint publications
Michael T Schaub
2 joint publications
Rebekka K Schneider
2 joint publications
Katharina C Reimer
2 joint publications
Peter Boor
