Nikolay V Dokholyan

89PUBLICATIONS
227CO-AUTHORS
Semi- and unsupervised learningBiomolecular modelling and designArchitecture for disaster reliefBioinformatic methods developmentComputer aided design
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Publications (89)

|Apr 27, 2026
Modular Deep Learning for Direct RNA Sequence Design via Self-Contained RNA Units.

|Apr 08, 2026
A diffusion-based framework for designing molecules in flexible protein pockets.

Jian Wang, Dong Yan Zhang, Shreshty Budakoti

|Mar 27, 2026
ChironRNA: Steric Clashes Resolution in RNA Structures via E(3)-Equivariant Diffusion.

Jingyi Li, Jian Wang, Nikolay V Dokholyan

|Mar 03, 2026
Unified protein-small molecule graph neural networks for binding site prediction.

Jian Wang, Nikolay V Dokholyan

|Feb 27, 2026
ATLAS: Graph-based 3D RNA Motif Library Incorporating non-Watson-Crick Interactions.

Jingyi Li, Jian Wang, Srinivasan Ekambaram

|Jan 09, 2026
Multimodal Bond Reconstruction toward Generative Molecular Design.

Jian Wang, Nikolay V Dokholyan

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Frequent Collaborators

32 joint publications

Jian Wang

8 joint publications

Kirill A Afonin

5 joint publications

Congzhou Mike Sha

4 joint publications

Rakesh K Singh