Yun William Yu

17PUBLICATIONS
8CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Data structures and algorithmsMicrobial geneticsMolecular evolutionNatural language processing
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Publications (17)

|Jul 07, 2026
RAmpSim: a thermodynamic simulator for hybridization capture in metagenomic sequencing.

|Jul 07, 2026
Incorporating indel channels into average-case analysis of seed-chain-extend.

|May 13, 2026
KuPID: Kmer-based Upstream Preprocessing of Long Reads for Isoform Discovery.

|Dec 22, 2025
RAmpSim: A Thermodynamic Simulator for Hybridization Capture in Metagenomic Sequencing.

Aidan Zhang, Christina Boucher, Noelle Noyes

|Sep 23, 2025
Long-read reconstruction of many diverse haplotypes with devider.

Jim Shaw, Christina Boucher, Yun William Yu

|Oct 08, 2024
Rapid species-level metagenome profiling and containment estimation with sylph.

Jim Shaw, Yun William Yu

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Frequent Collaborators

6 joint publications

Jim Shaw

3 joint publications

Christina Boucher

3 joint publications

Noelle Noyes

2 joint publications

Bonnie Berger