Erik Sonnhammer

15PUBLICATIONS
49CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Genomics and transcriptomicsComputer graphicsBioinformatic methods developmentPlant and fungus systematics and taxonomy
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Publications (15)

|May 05, 2026
GeneSNAKE: a Python package for simulation of gene regulatory networks and perturbation-induced expression data.

|Jun 09, 2025
BiGSM: Bayesian inference of gene regulatory network via sparse modelling.

Hang Qin, Mateusz Garbulowski, Erik L L Sonnhammer

|Mar 24, 2025
Topology-based metrics for finding the optimal sparsity in gene regulatory network inference.

Nils Lundqvist, Mateusz Garbulowski, Thomas Hillerton

|Dec 19, 2024
The FunCoup Cytoscape App: multi-species network analysis and visualization.

Davide Buzzao, Lukas Steininger, Dimitri Guala

|Dec 12, 2024
New developments for the Quest for Orthologs benchmark service.

Adrian Altenhoff, Yannis Nevers, Vinh Tran

|Nov 12, 2024
FunCoup 6: advancing functional association networks across species with directed links and improved user experience.

Davide Buzzao, Emma Persson, Dimitri Guala

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Frequent Collaborators

3 joint publications

Deniz Seçilmiş

3 joint publications

Christophe Dessimoz

3 joint publications

Paul D Thomas

3 joint publications

Yanhui Hu