Zong-Yan Liu

6PUBLICATIONS
84CO-AUTHORS
Gene expression (incl. microarray and other genome-wide approaches)Plant developmental and reproductive biologyOrganic and low chemical input crop productionComputational linguisticsGenetically modified field crops and pasture
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Journal

Publications (6)

|Nov 24, 2025
GeneCAD: Plant Genome Annotation with a DNA Foundation Model.

Zong-Yan Liu, Ana Berthel, Eric Czech

|Sep 15, 2025
PlantCAD2: A Long-Context DNA Language Model for Cross-Species Functional Annotation in Angiosperms.

Jingjing Zhai, Aaron Gokaslan, Sheng-Kai Hsu

|Jul 17, 2025
Designing a nitrogen-efficient cold-tolerant maize for modern agricultural systems.

Jonathan Odilón Ojeda-Rivera, Allison C Barnes, Elizabeth A Ainsworth

|Jun 09, 2025
Cross-species modeling of plant genomes at single-nucleotide resolution using a pretrained DNA language model.

Jingjing Zhai, Aaron Gokaslan, Yair Schiff

|Feb 03, 2025
Extensive genome evolution distinguishes maize within a stable tribe of grasses.

Michelle C Stitzer, Arun S Seetharam, Armin Scheben

|Jun 19, 2024
Cross-species modeling of plant genomes at single nucleotide resolution using a pre-trained DNA language model.

Jingjing Zhai, Aaron Gokaslan, Yair Schiff

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Frequent Collaborators

6 joint publications

Jingjing Zhai

6 joint publications

Edward S Buckler

5 joint publications

M Cinta Romay

4 joint publications

Sheng-Kai Hsu