Zhiyuan Yuan

27PUBLICATIONS
98CO-AUTHORS
Earth and space science informaticsSpatial data and applicationsProteomics and metabolomicsGenomics and transcriptomicsDeep learning
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Publications (27)

|Jul 23, 2026
Spatial omics in the AI era: Technologies, algorithmic ecosystems, biological applications, and large model perspectives.

|Jul 09, 2026
NicheTrans: spatial-aware cross-omics translation.

|May 25, 2026
SOFisher: reinforcement learning-guided experiment designs for spatial omics.

|Apr 03, 2026
Benchmarking alignment methods for spatial transcriptomics data.

Yunzhi Yan, Tianyi Gu, Chengcheng Sun

|Apr 01, 2026
Scalable discovery of spatial multicellular patterns via neighborhood-to-sequence transformation.

Fangyuan Zhao, Sheng Wang, Zhikang Wang

|Mar 28, 2026
3d-OT: a deep geometry-aware framework for heterogeneous slices alignment of spatial multi-omics.

Bingjie Dai, Litai Yi, Peizhuo Wang

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Frequent Collaborators

9 joint publications

Yi Zhao

5 joint publications

Michael Q Zhang

5 joint publications

Qi Zou

5 joint publications

Senlin Lin