James R Brown

13PUBLICATIONS
31CO-AUTHORS
Biomolecular modelling and designPhylogeny and comparative analysisCheminformatics and quantitative structure-activity relationshipsMedical mycologyMedical parasitology
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Publications (13)

|Jun 25, 2026
Nevermore: Target-Conditioned Protein-Ligand Representation Learning for Multi-Objective Lead Optimization with Database-Grounded Retrieval.

|Mar 29, 2025
Enhancing nucleotide sequence representations in genomic analysis with contrastive optimization.

Mohammadsaleh Refahi, Bahrad A Sokhansanj, Joshua C Mell

|Mar 06, 2021
Expanding the drug discovery space with predicted metabolite-target interactions.

Andrea Nuzzo, Somdutta Saha, Ellen Berg

|Jul 29, 2020
Multi-omic meta-analysis identifies functional signatures of airway microbiome in chronic obstructive pulmonary disease.

Zhang Wang, Yuqiong Yang, Zhengzheng Yan

|Jun 03, 2020
PICRUSt2 for prediction of metagenome functions.

Gavin M Douglas, Vincent J Maffei, Jesse R Zaneveld

|Dec 15, 2019
Obesity and disease severity magnify disturbed microbiome-immune interactions in asthma patients.

David Michalovich, Noelia Rodriguez-Perez, Sylwia Smolinska

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Frequent Collaborators

2 joint publications

Stephanie Van Horn

2 joint publications

Gail L Rosen

2 joint publications

Hyunwoo Yoo

2 joint publications

Bahrad A Sokhansanj