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Justin P Shaffer

16PUBLICATIONS

109CO-AUTHORS

Microbial geneticsMedical biochemistry and metabolomics not elsewhere classifiedMetabolic medicineComputational ecology and phylogeneticsMicrobial taxonomy

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Publications (16)

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|Oct 10, 2025

Streamlined extraction of nucleic acids and metabolites from low- and high-biomass samples using isopropanol and matrix tubes.

Caitriona Brennan, Justin P Shaffer, Pedro Belda-Ferre

|Oct 18, 2023

Author Correction: Enhancing untargeted metabolomics using metadata-based source annotation.

Julia M Gauglitz, Kiana A West, Wout Bittremieux

|Nov 28, 2022

Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity.

Justin P Shaffer, Louis-Félix Nothias, Luke R Thompson

|Jul 07, 2022

Enhancing untargeted metabolomics using metadata-based source annotation.

Julia M Gauglitz, Kiana A West, Wout Bittremieux

|Jun 17, 2022

A comparison of six DNA extraction protocols for 16S, ITS and shotgun metagenomic sequencing of microbial communities.

Justin P Shaffer, Carolina S Carpenter, Cameron Martino

|Apr 28, 2022

Compositionally Aware Phylogenetic Beta-Diversity Measures Better Resolve Microbiomes Associated with Phenotype.

Cameron Martino, Daniel McDonald, Kalen Cantrell

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Frequent Collaborators

8 joint publications

Rob Knight

6 joint publications

Cameron Martino

6 joint publications

Daniel McDonald

5 joint publications

Pieter C Dorrestein

5 joint publications

Pedro Belda-Ferre

4 joint publications

Austin D Swafford

4 joint publications

MacKenzie Bryant

3 joint publications

Jack A Gilbert

3 joint publications

Kristen L Beck

3 joint publications

Luke R Thompson

Frequent Collaborators

8 joint publications

Rob Knight

6 joint publications

Cameron Martino

6 joint publications

Daniel McDonald

5 joint publications

Pieter C Dorrestein

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