Louis du Plessis

23PUBLICATIONS
342CO-AUTHORS
Environmental biotechnology diagnostics (incl. biosensors)Phylogeny and comparative analysisAgricultural spatial analysis and modellingHuman impacts of climate change and human adaptationSoftware testing, verification and validation
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Publications (23)

|Apr 06, 2026
From clinics to sewers: leveraging environmental surveillance and whole genome sequencing to inform transmission of ESBL-<i>Escherichia coli</i> in Switzerland.

Sheena Conforti, Louis du Plessis, Claudia Bagutti

|Nov 24, 2025
TyCHE enables time-resolved lineage tracing of heterogeneously-evolving populations.

Jessie J Fielding, Sherry Wu, Hunter J Melton

|Aug 29, 2025
Poultry farm density and proximity drive highly pathogenic avian influenza spread.

Claire Guinat, Cecilia Valenzuela Agüí, François-Xavier Briand

|Jan 08, 2025
Disruption of seasonal influenza circulation and evolution during the 2009 H1N1 and COVID-19 pandemics in Southeastern Asia.

Zhiyuan Chen, Joseph L-H Tsui, Jun Cai

|Nov 07, 2024
COVID-19 pandemic interventions reshaped the global dispersal of seasonal influenza viruses.

Zhiyuan Chen, Joseph L-H Tsui, Bernardo Gutierrez

|Sep 30, 2024
V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation.

Lara Fuhrmann, Kim Philipp Jablonski, Ivan Topolsky

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Frequent Collaborators

14 joint publications

Oliver George Pybus

10 joint publications

Moritz U G Kraemer

6 joint publications

Nuno Rodrigues Faria

6 joint publications

Andrew Rambaut