Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Matej Praprotnik

19PUBLICATIONS
94CO-AUTHORS
Computational methods in fluid flow, heat and mass transfer (incl. computational fluid dynamics)Bioinformatic methods developmentGene and molecular therapyStructural biology (incl. macromolecular modelling)Aerodynamics (excl. hypersonic aerodynamics)
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (19)

Sort by Publication Date:
|Mar 10, 2026
Open-boundary molecular dynamics of red blood cell suspensions.

Maša Lah, Tilen Potisk, Matej Praprotnik

|Feb 03, 2026
Achieving all-atom molecular dynamics accuracy from the Poisson-Boltzmann method through machine learning.

Ema Slejko, Amaury Coste, Tilen Potisk

|Aug 21, 2025
Dissipative Particle Dynamics Models of Encapsulated Microbubbles and Nanoscale Gas Vesicles for Biomedical Ultrasound Simulations.

Nikolaos Ntarakas, Maša Lah, Daniel Svenšek

|Apr 02, 2025
The need to implement FAIR principles in biomolecular simulations.

Rommie E Amaro, Johan Åqvist, Ivet Bahar

|Jan 08, 2025
Open-boundary molecular dynamics of ultrasound using supramolecular water models.

Maša Lah, Nikolaos Ntarakas, Tilen Potisk

|Dec 20, 2023
Developing an Implicit Solvation Machine Learning Model for Molecular Simulations of Ionic Media.

Amaury Coste, Ema Slejko, Julija Zavadlav

Pageof 4

Frequent Collaborators

5 joint publications

Julija Zavadlav

4 joint publications

Tilen Potisk

2 joint publications

Petros Koumoutsakos

2 joint publications

Siewert J Marrink

2 joint publications

Nikolaos Ntarakas

2 joint publications

Maša Lah

2 joint publications

Petra Papež

1 joint publications

Jens H Walther

1 joint publications

Robinson Cortes-Huerto

1 joint publications

Luigi Delle Site

Frequent Collaborators

5 joint publications

Julija Zavadlav

4 joint publications

Tilen Potisk

2 joint publications

Petros Koumoutsakos

2 joint publications

Siewert J Marrink

Top Related Videos

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies
07:31

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies

Published on : Sep 01, 2023

3.3K
Asthma Detection Research Based on Voice Signal Processing and Machine Learning
04:04

Asthma Detection Research Based on Voice Signal Processing and Machine Learning

Published on : Jul 22, 2025

1.0K
Multi-timescale Microscopy Methods for the Characterization of Fluorescently-labeled Microbubbles for Ultrasound-Triggered Drug Release
06:02

Multi-timescale Microscopy Methods for the Characterization of Fluorescently-labeled Microbubbles for Ultrasound-Triggered Drug Release

Published on : Jun 12, 2021

4.0K
See more related videos

Top Related Videos

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies
07:31

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies

Published on : Sep 01, 2023

3.3K
Asthma Detection Research Based on Voice Signal Processing and Machine Learning
04:04

Asthma Detection Research Based on Voice Signal Processing and Machine Learning

Published on : Jul 22, 2025

1.0K
Multi-timescale Microscopy Methods for the Characterization of Fluorescently-labeled Microbubbles for Ultrasound-Triggered Drug Release
06:02

Multi-timescale Microscopy Methods for the Characterization of Fluorescently-labeled Microbubbles for Ultrasound-Triggered Drug Release

Published on : Jun 12, 2021

4.0K
See more related videos