Brian Cleary

8PUBLICATIONS

48CO-AUTHORS

Gene expression (incl. microarray and other genome-wide approaches)Computational complexity and computabilityGenomics and transcriptomicsComputational imaging

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Publications (8)

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|Jun 29, 2026

Accurate trajectory inference in time-series spatial transcriptomics with structurally-constrained optimal transport.

|Oct 07, 2024

Scalable, compressed phenotypic screening using pooled perturbations.

Nuo Liu, Walaa E Kattan, Benjamin E Mead

|Feb 07, 2024

Convergence of coronary artery disease genes onto endothelial cell programs.

Gavin R Schnitzler, Helen Kang, Shi Fang

|Jun 02, 2023

Optimization-based decoding of Imaging Spatial Transcriptomics data.

John P Bryan, Loïc Binan, Cai McCann

|Jun 30, 2021

LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding.

Kerstin U Ludwig, Ricarda M Schmithausen, David Li

|Apr 16, 2021

Compressed sensing for highly efficient imaging transcriptomics.

Brian Cleary, Brooke Simonton, Jon Bezney

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Frequent Collaborators

Aviv Regev

Nir Paran

Rhiannon Macrae

Lara M Hochfeld

Mikołaj Słabicki

Manuel Döhla

Eva C Beins

Gero Wilbring

Max L Jacobs

Ricarda M Schmithausen

Frequent Collaborators

Aviv Regev

Nir Paran

Rhiannon Macrae

Lara M Hochfeld