Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Alexander Derry

5PUBLICATIONS
25CO-AUTHORS
Proteomics and metabolomicsEvolution of developmental systemsBioinformatic methods developmentDeep learningCellular nervous system
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Featured researcher

Get your video featured.

JoVEPublish with JoVE
Journal

Publications (5)

Sort by Publication Date:
|Aug 20, 2025
Protein functional site annotation using local structure embeddings.

Alexander Derry, Alp Tartici, Russ B Altman

|Jan 17, 2025
Simulating 500 million years of evolution with a language model.

Thomas Hayes, Roshan Rao, Halil Akin

|Dec 15, 2022
COLLAPSE: A representation learning framework for identification and characterization of protein structural sites.

Alexander Derry, Russ B Altman

|Feb 09, 2022
Protein sequence design with a learned potential.

Namrata Anand, Raphael Eguchi, Irimpan I Mathews

|Apr 25, 2017
Flexible and stretchable nanowire-coated fibers for optoelectronic probing of spinal cord circuits.

Chi Lu, Seongjun Park, Thomas J Richner

Pageof 1

Frequent Collaborators

1 joint publications

Thomas J Richner

1 joint publications

Chong Hou

1 joint publications

Siyuan Rao

1 joint publications

Jeewoo Kang

1 joint publications

Namrata Anand

1 joint publications

Raphael Eguchi

1 joint publications

Carla P Perez

1 joint publications

Po-Ssu Huang

1 joint publications

Thomas Hayes

1 joint publications

Halil Akin

Frequent Collaborators

1 joint publications

Thomas J Richner

1 joint publications

Chong Hou

1 joint publications

Siyuan Rao

1 joint publications

Jeewoo Kang

Top Related Videos

A Protocol for Computer-Based Protein Structure and Function Prediction
16:41

A Protocol for Computer-Based Protein Structure and Function Prediction

Published on : Nov 03, 2011

68.9K
Analyzing Mitochondrial Morphology Through Simulation Supervised Learning
12:06

Analyzing Mitochondrial Morphology Through Simulation Supervised Learning

Published on : Mar 03, 2023

3.9K
See more related videos

Top Related Videos

A Protocol for Computer-Based Protein Structure and Function Prediction
16:41

A Protocol for Computer-Based Protein Structure and Function Prediction

Published on : Nov 03, 2011

68.9K
Analyzing Mitochondrial Morphology Through Simulation Supervised Learning
12:06

Analyzing Mitochondrial Morphology Through Simulation Supervised Learning

Published on : Mar 03, 2023

3.9K
See more related videos