Xi Chen

23PUBLICATIONS
72CO-AUTHORS
Nanoscale characterisationGene expression (incl. microarray and other genome-wide approaches)Modelling and simulationEpigenetics (incl. genome methylation and epigenomics)Formal methods for software
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Publications (23)

|Feb 02, 2026
Nanog mediated control of TBX3-GATA6 circuitry in primitive endoderm differentiation of mESCs.

Hao Wu, Ying Ye, Hongxia Dai

|Jan 12, 2026
Single-nucleus chromatin accessibility and gene expression co-profiling by ISSAAC-seq.

Wei Xu, Yukun Hu, Yunlong Zhang

|Apr 17, 2025
scMultiSim: simulation of single-cell multi-omics and spatial data guided by gene regulatory networks and cell-cell interactions.

Hechen Li, Ziqi Zhang, Michael Squires

|Sep 24, 2024
scMMO-atlas: a single cell multimodal omics atlas and portal for exploring fine cell heterogeneity and cell dynamics.

Wenwen Cheng, Changhui Yin, Shiya Yu

|Sep 15, 2024
A simple, robust, cost-effective, and low-input ChIP-seq method for profiling histone modifications and Pol II in plants.

Danling Zhu, Yi Wen, Yifang Tan

|Apr 05, 2024
A machine-readable specification for genomics assays.

Ali Sina Booeshaghi, Xi Chen, Lior Pachter

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Frequent Collaborators

5 joint publications

Sarah A Teichmann

5 joint publications

Wenfei Jin

4 joint publications

Ziqi Zhang

4 joint publications

Xiuwei Zhang