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Chase Holdener

5PUBLICATIONS

17CO-AUTHORS

Genomics and transcriptomicsEpigenetics (incl. genome methylation and epigenomics)Innate immunity

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Publications (5)

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|Mar 27, 2026

Smoothie: efficient inference and integration of spatial co-expression networks from denoised spatial transcriptomics data.

Chase Holdener, Iwijn De Vlaminck

|Mar 06, 2026

Spatial transcriptomics maps host-gut microbiome biogeography at high resolution.

Ioannis Ntekas, Lena Takayasu, David W McKellar

|Jan 26, 2026

A temporal and spatial atlas of adaptive immune responses in the lymph node following viral infection.

Shaowen Jiang, Jahanara Freedman, Madhav Mantri

|Mar 10, 2025

Smoothie: Efficient Inference of Spatial Co-expression Networks from Denoised Spatial Transcriptomics Data.

Chase Holdener, Iwijn De Vlaminck

|Feb 20, 2025

A Temporal and Spatial Atlas of Adaptive Immune Responses in the Lymph Node Following Viral Infection.

Shaowen Jiang, Madhav Mantri, Viviana Maymi

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Frequent Collaborators

5 joint publications

Iwijn De Vlaminck

2 joint publications

Shaowen Jiang

2 joint publications

Madhav Mantri

2 joint publications

Peter Schweitzer

2 joint publications

Ioannis Ntekas

2 joint publications

Andrew I Flyak

2 joint publications

Brian D Rudd

1 joint publications

Viviana Maymi

1 joint publications

Subash Bhandari

1 joint publications

Deborah J Fowell

Frequent Collaborators

5 joint publications

Iwijn De Vlaminck

2 joint publications

Shaowen Jiang

2 joint publications

Madhav Mantri

2 joint publications

Peter Schweitzer

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