Josh L Espinoza

12PUBLICATIONS
55CO-AUTHORS
Proteomics and metabolomicsMicrobial taxonomyHaematologyWater treatment processesMicrobial genetics
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Publications (12)

|Jun 05, 2026
Leviathan: A fast, memory-efficient, and scalable taxonomic and pathway profiler for (pan)genome-resolved metagenomics and metatranscriptomics.

|Nov 28, 2024
Blood cultures contain populations of genetically diverse Candida albicans strains that may differ in echinocandin tolerance and virulence.

Giuseppe Fleres, Shaoji Cheng, Hassan Badrane

|Aug 29, 2024
Unveiling Molecular Diversity in Cerebral Thrombi via Spatial Transcriptomics.

Melanie Walker, Emma Federico, Josh L Espinoza

|Jul 17, 2024
Mixotrophic growth of a ubiquitous marine diatom.

Manish Kumar, Juan D Tibocha-Bonilla, Zoltán Füssy

|Jun 23, 2024
Unveiling the microbial realm with VEBA 2.0: a modular bioinformatics suite for end-to-end genome-resolved prokaryotic, (micro)eukaryotic and viral multi-omics from either short- or long-read sequencing.

Josh L Espinoza, Allan Phillips, Melanie B Prentice

|Apr 15, 2024
Host-microbiome associations in saliva predict COVID-19 severity.

Hend Alqedari, Khaled Altabtbaei, Josh L Espinoza

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Frequent Collaborators

6 joint publications

Christopher L Dupont

2 joint publications

Marcelo Freire

1 joint publications

Naisha Shah

1 joint publications

Aubrie O'Rourke