Veli Mäkinen

6PUBLICATIONS
4CO-AUTHORS
Sequence analysisStatistical mechanics, physical combinatorics and mathematical aspects of condensed matterGene expression (incl. microarray and other genome-wide approaches)Programming languages
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Publications (6)

|Jul 15, 2025
Exploiting uniqueness: seed-chain-extend alignment on elastic founder graphs.

Nicola Rizzo, Manuel Cáceres, Veli Mäkinen

|Mar 12, 2024
Finding maximal exact matches in graphs.

Nicola Rizzo, Manuel Cáceres, Veli Mäkinen

|Mar 11, 2024
Tackling reference bias in genotyping by using founder sequences with PanVC 3.

Tuukka Norri, Veli Mäkinen

|Jul 26, 2023
Chaining for accurate alignment of erroneous long reads to acyclic variation graphs.

Jun Ma, Manuel Cáceres, Leena Salmela

|Jul 14, 2021
Founder reconstruction enables scalable and seamless pangenomic analysis.

Tuukka Norri, Bastien Cazaux, Saska Dönges

|May 28, 2019
Linear time minimum segmentation enables scalable founder reconstruction.

Tuukka Norri, Bastien Cazaux, Dmitry Kosolobov

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