Search research articles

ABOUT JoVE

Overview Leadership Blog JoVE Help Center

AUTHORS

Publishing Process Editorial Board Scope & Policies Peer Review FAQ Submit

LIBRARIANS

Testimonials Subscriptions Access Resources Library Advisory Board FAQ

RESEARCH

JoVE Journal Methods Collections JoVE Encyclopedia of Experiments Archive

EDUCATION

JoVE Core JoVE Business JoVE Science Education JoVE Lab Manual Faculty Resource Center Faculty Site

Terms & Conditions of Use

Stefano Raniolo

6PUBLICATIONS

68CO-AUTHORS

Bioinformatic methods developmentSemi- and unsupervised learningEpigenetics (incl. genome methylation and epigenomics)Biomolecular modelling and designComputational chemistry

Featured researcher

Get your video featured.

Publish with JoVE

Featured researcher

Get your video featured.

Publish with JoVE

Publications (6)

Sort by Publication Date:

|Aug 19, 2025

HEroBM: A deep equivariant graph neural network for high-fidelity backmapping from coarse-grained to all-atom structures.

Daniele Angioletti, Stefano Raniolo, Vittorio Limongelli

|Mar 04, 2025

PLUMED Tutorials: A collaborative, community-driven learning ecosystem.

Gareth A Tribello, Massimiliano Bonomi, Giovanni Bussi

|Nov 07, 2023

Conformational plasticity and allosteric communication networks explain Shelterin protein TPP1 binding to human telomerase.

Simone Aureli, Vince Bart Cardenas, Stefano Raniolo

|Sep 01, 2023

Perspectives on Ligand/Protein Binding Kinetics Simulations: Force Fields, Machine Learning, Sampling, and User-Friendliness.

Paolo Conflitti, Stefano Raniolo, Vittorio Limongelli

|Aug 21, 2020

Ligand binding free-energy calculations with funnel metadynamics.

Stefano Raniolo, Vittorio Limongelli

|Jul 26, 2020

Protein-ligand binding with the coarse-grained Martini model.

Paulo C T Souza, Sebastian Thallmair, Paolo Conflitti

Pageof 1

Frequent Collaborators

6 joint publications

Vittorio Limongelli

2 joint publications

Paolo Conflitti

2 joint publications

Simone Aureli

1 joint publications

Paulo C T Souza

1 joint publications

Sebastian Thallmair

1 joint publications

Carlos Ramírez-Palacios

1 joint publications

Riccardo Alessandri

1 joint publications

Siewert J Marrink

1 joint publications

Gareth A Tribello

1 joint publications

Massimiliano Bonomi

Frequent Collaborators

6 joint publications

Vittorio Limongelli

2 joint publications

Paolo Conflitti

2 joint publications

Simone Aureli

1 joint publications

Paulo C T Souza

Top Related Videos

Brain Mapping Using a Graphene Electrode Array

Brain Mapping Using a Graphene Electrode Array

Published on : Oct 20, 2023

The Collective Trust Game: An Online Group Adaptation of the Trust Game Based on the HoneyComb Paradigm

The Collective Trust Game: An Online Group Adaptation of the Trust Game Based on the HoneyComb Paradigm

Published on : Oct 20, 2022

Analyzing Telomeric Protein-DNA Interactions Using Single-Molecule Magnetic Tweezers

Analyzing Telomeric Protein-DNA Interactions Using Single-Molecule Magnetic Tweezers

Published on : Aug 30, 2024

See more related videos

Top Related Videos

Brain Mapping Using a Graphene Electrode Array

Brain Mapping Using a Graphene Electrode Array

Published on : Oct 20, 2023

The Collective Trust Game: An Online Group Adaptation of the Trust Game Based on the HoneyComb Paradigm

The Collective Trust Game: An Online Group Adaptation of the Trust Game Based on the HoneyComb Paradigm

Published on : Oct 20, 2022

Analyzing Telomeric Protein-DNA Interactions Using Single-Molecule Magnetic Tweezers

Analyzing Telomeric Protein-DNA Interactions Using Single-Molecule Magnetic Tweezers

Published on : Aug 30, 2024

See more related videos