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JoVE Journal Methods Collections JoVE Encyclopedia of Experiments Archive

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Sebastian Schmidt

6PUBLICATIONS

5CO-AUTHORS

Statistical and quantitative geneticsFormal methods for softwareData structures and algorithmsComputational complexity and computability

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Publications (6)

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|Jul 07, 2026

Scalable computation of ultrabubbles in pangenomes by orienting bidirected graphs.

|Apr 29, 2025

Applying the Safe-And-Complete Framework to Practical Genome Assembly.

Sebastian Schmidt, Santeri Toivonen, Paul Medvedev

|Jul 04, 2023

Eulertigs: minimum plain text representation of k-mer sets without repetitions in linear time.

Sebastian Schmidt, Jarno N Alanko

|Jun 09, 2023

Matchtigs: minimum plain text representation of k-mer sets.

Sebastian Schmidt, Shahbaz Khan, Jarno N Alanko

|Feb 24, 2023

Eulertigs: minimum plain text representation of k-mer sets without repetitions in linear time.

Sebastian Schmidt, Jarno N Alanko

|Feb 13, 2023

The omnitig framework can improve genome assembly contiguity in practice.

Sebastian Schmidt, Santeri Toivonen, Paul Medvedev

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Frequent Collaborators

Alexandru I Tomescu

Jarno N Alanko

Shahbaz Khan

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