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Updated: Aug 8, 2026

Purification of the Membrane Compartment for Endoplasmic Reticulum-associated Degradation of Exogenous Antigens in Cross-presentation
Published on: August 21, 2017
Cytoplasmic processing is a prerequisite for presentation of an endogenous antigen by major histocompatibility
J D Lich1, J F Elliott, J S Blum
1Department of Microbiology and Immunology and the Walther Oncology Center, Indiana University School of Medicine, Indianapolis, Indiana 46202, USA.
Insights
Major histocompatibility complex (MHC) class II antigen presentation involves distinct processing pathways for exogenous versus cytoplasmic antigens. Cytoplasmic antigen processing for MHC class II presentation relies on proteasomes and calpains.
Area of Science:
- Immunology
- Molecular Biology
- Cellular Biology
Background:
- Major histocompatibility complex (MHC) class II-restricted presentation of cytoplasmic antigens is known, but the processing mechanisms remain unclear.
- Understanding antigen processing is crucial for deciphering immune responses and developing targeted therapies.
Purpose of the Study:
- To investigate the processing pathways of exogenous and endogenous glutamate decarboxylase (GAD) for MHC class II presentation.
- To identify the key proteases involved in the presentation of cytoplasmic antigens via MHC class II.
Main Methods:
- Biochemical and functional studies were conducted using human histocompatibility leukocyte antigen (HLA) class II-DR4(+) antigen-presenting cells.
- Antigen presentation efficiency was assessed for both exogenously introduced and cytoplasmically expressed GAD.
- The role of endosomal/lysosomal and cytoplasmic proteases (proteasome, calpain) in antigen processing was evaluated.
Main Results:
- Efficient presentation of GAD epitopes occurred irrespective of exogenous or cytoplasmic delivery, requiring peptide-antigen and newly synthesized MHC class II molecules.
- Exogenous GAD processing required endosomal/lysosomal acidification and proteases, following the classical pathway.
- Endogenous GAD processing depended on cytoplasmic proteases, including the proteasome and calpain, necessitating translocation to membrane organelles.
Conclusions:
- Antigen processing for MHC class II presentation diverges based on delivery route, with cytoplasmic antigens utilizing a distinct pathway involving proteasomes and calpains.
- Translocation of processed cytoplasmic antigens into membrane organelles is essential for MHC class II presentation.
- These findings elucidate novel roles for cytoplasmic proteases in MHC class II-restricted antigen presentation.
Abstract:
Biochemical and functional studies have demonstrated major histocompatibility complex (MHC) class II-restricted presentation of select epitopes derived from cytoplasmic antigens, with few insights into the processing reactions necessary for this alternate pathway. Efficient presentation of an immunodominant epitope derived from glutamate decarboxylase (GAD) was observed regardless of whether this antigen was delivered exogenously or via a cytoplasmic route into human histocompatibility leukocyte antigen class II-DR4(+) antigen-presenting cells. Presentation of exogenous as well as cytoplasmic GAD required the intersection of GAD peptides and newly synthesized class II proteins. By contrast, proteolytic processing of this antigen was highly dependent upon the route of antigen delivery. Exogenous GAD followed the classical pathway for antigen processing, with an absolute requirement for endosomal/lysosomal acidification as well as cysteine and aspartyl proteases resident within these organelles. Presentation of endogenous GAD was dependent upon the action of cytoplasmic proteases, including the proteasome and calpain. Thus, translocation of processed antigen from the cytoplasm into membrane organelles is necessary for class II-restricted presentation via this alternate pathway. Further trimming of these peptides after translocation was mediated by acidic proteases within endosomes/lysosomes, possibly after or before class II antigen binding. These studies suggest that processing of exogenous and cytoplasmic proteins occurs through divergent but overlapping pathways. Furthermore, two cytoplasmic proteases, the proteasome and calpain, appear to play important roles in MHC class II-restricted antigen presentation.
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