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Updated: Aug 9, 2026

In Vitro Analysis of PDZ-dependent CFTR Macromolecular Signaling Complexes
Published on: August 13, 2012
Dynamic interaction of CD2 with the GYF and the SH3 domain of compartmentalized effector molecules
Christian Freund1, Ronald Kühne, Hailin Yang
1Protein Engineering Group and Molecular Modeling Group, Forschungsinstitut für Molekulare Pharmakologie and Freie Universität Berlin, Robert-Rössle-Strasse 10, D-13125 Berlin, Germany. freund@fmp-berlin.de
Insights
The GYF domain of CD2BP2 binds CD2, regulating T cell signaling. Upon CD2 clustering, Fyn SH3 replaces CD2BP2, switching CD2 function.
Area of Science:
- Molecular Biology
- Cell Signaling
- Structural Biology
Background:
- Intracellular protein interaction domains are crucial for eukaryotic cell signaling pathways.
- The CD2BP2 adaptor protein plays a role in T cell activation by binding to the CD2 cytoplasmic tail, influencing interleukin-2 production.
Purpose of the Study:
- To elucidate the structural basis of the interaction between the CD2BP2 GYF domain and the CD2 cytoplasmic tail.
- To investigate the competitive binding of tyrosine kinases to the CD2 proline-rich sequence and its functional implications in T cells.
Main Methods:
- X-ray crystallography to determine the structure of the CD2BP2 GYF domain bound to a CD2 peptide.
- Nuclear Magnetic Resonance (NMR) spectroscopy to analyze protein-protein interactions and competition assays.
- Co-immunoprecipitation experiments to assess in vivo protein interactions within different cellular compartments.
Main Results:
- The GYF domain utilizes conserved hydrophobic residues to form a unique interaction surface for proline-rich motifs, distinct from SH3 domains.
- Fyn SH3 domain, but not Lck SH3, competes with CD2BP2 for binding to the CD2 proline-rich sequence in vitro.
- In vivo, CD2BP2 binds CD2 in soluble compartments, but Fyn SH3 replaces it in lipid rafts after CD2 ectodomain clustering.
Conclusions:
- The study reveals a novel binding mechanism for the GYF domain involving a single hydrophobic surface.
- A functional switch in CD2 signaling is demonstrated, mediated by competition between CD2BP2 and Fyn SH3 for CD2 binding, triggered by extracellular signals and lipid raft translocation.
Abstract:
Intracellular protein interaction domains are essential for eukaryotic signaling. In T cells, the CD2BP2 adaptor binds two membrane-proximal proline-rich motifs in the CD2 cytoplasmic tail via its GYF domain, thereby regulating interleukin-2 production. Here we present the structure of the GYF domain in complex with a CD2 tail peptide. Unlike SH3 domains, which use two surface pockets to accommodate proline residues of ligands, the GYF domain employs phylogenetically conserved hydrophobic residues to create a single interaction surface. NMR analysis shows that the Fyn but not the Lck tyrosine kinase SH3 domain competes with CD2BP2 GYF-domain binding to the same CD2 proline-rich sequence in vitro. To test the in vivo significance of this competition, we used co-immunoprecipitation experiments and found that CD2BP2 is the ligand of the membrane-proximal proline-rich tandem repeat of CD2 in detergent-soluble membrane compartments, but is replaced by Fyn SH3 after CD2 is translocated into lipid rafts upon CD2 ectodomain clustering. This unveils the mechanism of a switch of CD2 function due to an extracellular mitogenic signal.
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