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Updated: Aug 29, 2026

Determining 3'-Termini and Sequences of Nascent Single-Stranded Viral DNA Molecules during HIV-1 Reverse Transcription in Infected Cells
Published on: January 30, 2019
Topoisomerase I dissociates human immunodeficiency virus type 1 reverse transcriptase from genomic RNAs
Hidehiro Takahashi1, Hirofumi Sawa, Hideki Hasegawa
1Department of Pathology, National Institute of Infectious Diseases, Toyama 1-23-1, Shinjuku-ku, Tokyo 162-8640, Japan. htakahas@nih.go.jp
Insights
Human topoisomerase I specifically releases HIV-1 reverse transcriptase from RNA, unlike other proteins. This suggests a key role for topoisomerase I in regulating HIV-1 replication and reverse transcriptase binding.
Area of Science:
- Molecular Biology
- Virology
- Biochemistry
Background:
- Human topoisomerase I and HIV-1 reverse transcriptase (RT) both bind to structural RNAs.
- These molecules cooperate in synthesizing complementary DNA (cDNA) during HIV-1 replication.
Purpose of the Study:
- To investigate the specific interaction between human topoisomerase I and HIV-1 RT binding to RNA.
- To determine if topoisomerase I can dissociate other RNA-binding proteins or viral RTs.
Main Methods:
- In vitro binding assays were used to assess the dissociation of HIV-1 RT from RNA by human topoisomerase I.
- The effect of topoisomerase I on the binding of HIV-1 nucleocapsid proteins and murine leukemia virus RT to RNA was also examined.
Main Results:
- Human topoisomerase I selectively dissociated HIV-1 RT, which exhibits strong binding to structural RNAs.
- Topoisomerase I did not dissociate HIV-1 nucleocapsid proteins or murine leukemia virus RT from RNA.
- This indicates a specific interaction between human topoisomerase I and HIV-1 RT.
Conclusions:
- Human topoisomerase I plays a specific role in regulating the binding of HIV-1 RT to structural RNAs.
- Topoisomerase I may be a critical factor in the HIV-1 replication cycle.
- Targeting this interaction could offer new therapeutic strategies for HIV-1 infection.
Abstract:
Both HIV-1 reverse transcriptase (RT) and topoisomerase I bind to structural RNAs and they cooperate to synthesize cDNA during the replication of HIV-1. In this study, we find that human topoisomerase I exclusively dissociated HIV-1 reverse transcriptase, which strongly binds to structural RNAs. Meanwhile, topoisomerase I did not dissociate either HIV-1 nucleocapsid proteins or murine leukemia virus RT which was bound to RNA. We propose that human topoisomerase I may regulate the binding of RT to RNAs and play a pivotal role in HIV-1 replication.
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