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Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions
Published on: June 28, 2018
Repression of class II major histocompatibility complex genes by cyclic AMP is mediated by conserved promoter
1Department of Cancer Biology, Harvard School of Public Health, Boston, Massachusetts 02115.
Insights
Elevated cyclic AMP (cAMP) inhibits class II major histocompatibility complex (MHC) antigen expression by targeting specific DNA elements in the MHC genes. This reveals a dual role for these DNA sequences in regulating gene expression.
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- Interleukin-4 (IL-4) and interferon-gamma (IFN-gamma) induce class II major histocompatibility complex (MHC) antigen expression.
- Elevated intracellular cyclic adenosine monophosphate (cAMP) levels, induced by agents like prostaglandins, inhibit this MHC antigen induction.
- The precise mechanism by which cAMP suppresses MHC class II expression remains to be fully elucidated.
Purpose of the Study:
- To investigate the molecular mechanism underlying cAMP-mediated downregulation of class II MHC gene expression.
- To analyze the impact of elevated cAMP on cell surface expression, mRNA levels, and promoter activity of murine A alpha and E beta class II MHC genes.
Main Methods:
- Analysis of cell surface expression, mRNA levels, and promoter activity of A alpha and E beta class II MHC genes.
- Utilized reporter gene assays with specific promoter sequences (151 bp of A alpha, 192 bp of E beta).
- Performed mutational analysis on the A alpha promoter to identify key DNA regulatory elements.
Main Results:
- Elevated cAMP caused a coordinated repression of both basal and cytokine-induced A alpha and E beta expression.
- Specific promoter regions (151 bp A alpha, 192 bp E beta) were sufficient to confer cAMP-mediated repression.
- The conserved S and X1 DNA elements in the A alpha promoter were identified as crucial mediators of cAMP downregulation, also essential for cytokine induction.
Conclusions:
- Identified specific DNA elements (S and X1) that mediate the repression of class II MHC genes by cAMP.
- Demonstrated that the same DNA sequences can mediate both positive (cytokine induction) and negative (cAMP repression) regulation of class II MHC expression.
- Provides a deeper understanding of the complex regulatory network controlling immune responses at the molecular level.
Abstract:
The induction of cell surface expression of class II major histocompatibility complex (MHC) antigens by interleukin (IL)-4 and interferon (IFN)-gamma is inhibited by elevation of intracellular cyclic (c)AMP, which is caused by immunomodulatory agents such as E series prostaglandins (PGEs). To investigate the mechanism of this downregulation, we have analyzed the consequences of elevating intracellular cAMP on cell surface expression, mRNA levels, and promoter activity of the murine A alpha and E beta class II MHC genes. Elevation of cAMP resulted in a coordinate repression of both basal and inducible A alpha and E beta expression. 151 and 192 base pairs of A alpha and E beta promoter sequence, respectively, were sufficient for conferring repression by cAMP on a reporter gene. A mutational analysis of the A alpha promoter revealed that cAMP downregulation is mediated by the conserved S and X1 DNA elements, which are also necessary for induction by cytokines. Downregulation by cAMP was not dependent on an intact X2 site, which is identical in sequence to the CRE element which mediates the positive regulation of several genes by cAMP. These results identify the DNA elements which mediate repression of class II MHC genes by cAMP and show that the same DNA sequences can mediate both positive and negative regulation of class II MHC expression.
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