Interaction of C-terminal sequences of human immunodeficiency virus reverse transcriptase with template primer

A L DeVico1, T D Copeland, S Oroszlan

  • 1Department of Cell Biology, Advanced BioScience Laboratories, Kensington, Maryland 20895.

Insights

A novel antibody (C2003) targeting human immunodeficiency virus type 1 (HIV-1) reverse transcriptase (RT) was developed. This antibody inhibits viral polymerase activity by interfering with template binding.

Area of Science:

  • Virology
  • Immunology
  • Molecular Biology

Background:

  • Human immunodeficiency virus type 1 (HIV-1) reverse transcriptase (RT) is a key enzyme for viral replication.
  • Developing inhibitors targeting HIV-1 RT is crucial for antiviral therapy.
  • Conserved regions in viral enzymes are potential targets for broadly active inhibitors.

Purpose of the Study:

  • To generate and characterize a monospecific antibody against a conserved region of HIV-1 RT.
  • To investigate the inhibitory mechanism of the antibody on viral reverse transcriptase activity.
  • To explore the potential of this antibody as an antiviral agent.

Main Methods:

  • Raised a rabbit monospecific antibody (C2003) against a synthetic peptide (CTP66) from HIV-1 RT p66.
  • Assessed the antibody's inhibitory effect on the polymerase activity of HIV-1 RT and other retroviral RTs.
  • Performed protection assays with template primer preincubation and kinetic studies (template primer concentration).

Main Results:

  • The C2003 antibody directly inhibited the polymerase activity of HIV-1 RT and RTs from various retroviruses.
  • Preincubation of HIV-1 RT with template primer protected the enzyme from antibody inhibition, an effect abrogated by high ionic strength.
  • Kinetic studies revealed competitive inhibition with respect to template primer concentration, indicating interference with template binding.

Conclusions:

  • The C2003 antibody effectively inhibits HIV-1 RT polymerase activity by interfering with template binding.
  • The conserved residues recognized by C2003 are likely directly involved in the template binding function of HIV-1 RT.
  • This antibody represents a potential tool for studying HIV-1 RT function and developing novel antiviral strategies.

Related Concept Videos

Retrovirus Life Cycles01:10

Retrovirus Life Cycles

Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the retrovirus to...
Telomeres and Telomerase02:41

Telomeres and Telomerase

In eukaryotic DNA replication, a single-stranded DNA fragment remains at the end of a chromosome after the removal of the final primer. This section of DNA cannot be replicated in the same manner as the rest of the strand because there is no 3’ end to which the newly synthesized DNA can attach. This non-replicated fragment results in gradual loss of the chromosomal DNA during each cell duplication. Additionally, it can induce a DNA damage response by enzymes that recognize single-stranded DNA.
LTR Retrotransposons03:08

LTR Retrotransposons

LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
Antiviral Nucleoside Inhibitors01:22

Antiviral Nucleoside Inhibitors

Antiviral Nucleoside InhibitorsAntiviral nucleoside inhibitors are structural analogs of natural nucleosides that interfere with viral DNA or RNA synthesis. These compounds selectively target viral polymerases due to their resemblance to host nucleosides, thereby disrupting viral genome replication.Mechanism of Acyclovir ActionAcyclovir is a guanosine analog with a three-carbon acyclic side chain. It selectively targets herpes simplex virus type 1 (HSV-1), herpes simplex virus type 2 (HSV-2),...
Inhibitors of Virion Maturation and Assembly01:19

Inhibitors of Virion Maturation and Assembly

As part of their replication cycle, certain viruses synthesize long precursor proteins called polyproteins within infected host cells. In human immunodeficiency virus (HIV), two major polyproteins are produced: Gag and Gag-Pol. The Gag polyprotein supplies the structural components of the virus, while Gag-Pol includes essential viral enzymes such as reverse transcriptase, integrase, and protease. After synthesis, these polyproteins move to the host cell membrane, where they assemble into an...