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Updated: Jul 18, 2026

A High Resolution Method to Monitor Phosphorylation-dependent Activation of IRF3
Published on: January 24, 2016
Regulation of IRAK-4 kinase activity via autophosphorylation within its activation loop
Hong Cheng1, Terri Addona, Hasmik Keshishian
1Department of Inflammation, Millennium Pharmaceuticals, Inc., Cambridge, MA 02139, USA. hong.cheng@novartis.com
Insights
Interleukin-1 receptor-associated kinase 4 (IRAK-4) activity is regulated by autophosphorylation at three key sites: T342, T345, and S346. These findings elucidate IRAK-4 activation mechanisms.
Area of Science:
- Immunology
- Molecular Biology
- Signal Transduction
Background:
- Interleukin-1 (IL-1) signaling involves MyD88, IRAK-1, and IRAK-4 recruitment to the IL-1 receptor.
- IRAK-1 activation occurs via autophosphorylation, with IRAK-4 acting as an upstream kinase.
- The activation mechanism and upstream kinase for IRAK-4 remain largely unknown.
Purpose of the Study:
- To identify the autophosphorylation sites responsible for IRAK-4 kinase activity.
- To elucidate the mechanism of IRAK-4 activation.
Main Methods:
- Liquid chromatography-tandem mass spectrometry (LC-MS/MS) to identify phosphorylation sites.
- Site-directed mutagenesis to create IRAK-4 mutants.
- Enzyme activity assays to assess kinase function.
Main Results:
- LC-MS/MS identified three autophosphorylation sites in the IRAK-4 activation loop: T342, T345, and S346.
- Mutagenesis of these sites (T342A, T345A, S346A) significantly reduced IRAK-4 catalytic activity (57%, 66%, 50% reduction, respectively).
- Phosphorylation was confirmed as autophosphorylation, an intramolecular event, not dependent on upstream kinases.
Conclusions:
- IRAK-4 kinase activity is critically dependent on autophosphorylation at T342, T345, and S346 within its activation loop.
- This study reveals the specific molecular events governing IRAK-4 activation, crucial for IL-1 signal transduction.
Abstract:
Interleukin-1 stimulation leads to the recruitment of MyD88, interleukin-1 receptor-associated kinase 1 (IRAK-1) and interleukin-1 receptor-associated kinase 4 (IRAK-4) to the IL-1 receptor. The formation of the IL-1 receptor complex triggers a series of IRAK-1 autophosphorylations, which result in activation. IRAK-4 is upstream of IRAK-1 and may act as IRAK-1 kinase to transmit the signal. To date, there is no upstream kinase reported for IRAK-4; the activation mechanism of IRAK-4 remains poorly understood. Here, for the first time, we report three autophosphorylation sites that are responsible for IRAK-4 kinase activity. LC-MS/MS analysis has identified phosphorylations at T342, T345, and S346, which reside within the activation loop. Site-directed mutants at these positions exhibit significant reductions in the catalytic activity of IRAK-4 (T342A: 57%; T345A: 66%; S346A: 50%). The absence of phosphorylation in kinase-dead IRAK-4 indicates that phosphorylations in the activation loop result from autophosphorylation rather than from phosphorylation by an upstream kinase. Finally, we demonstrate that autophosphorylation is an intramolecular event as wild-type IRAK-4 failed to transphosphorylate kinase-inactive IRAK-4. The present data indicate that the kinase activity of IRAK-4 is dependent on the autophosphorylations at T342, T345, and S346 in the activation loop.
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