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LR1, a lipopolysaccharide-responsive factor with binding sites in the immunoglobulin switch regions and heavy-chain
1Department of Molecular Biophysics and Biochemistry, Yale Medical School, New Haven, Connecticut 06510.
Insights
Researchers discovered a new protein, LPS-responsive factor 1 (LR1), that regulates B-cell isotype switching. This factor
Area of Science:
- Immunology
- Molecular Biology
- Genetics
Background:
- B-cell differentiation involves isotype-switch recombination, a crucial process for antibody diversity.
- The molecular mechanisms regulating isotype switching are not fully understood.
Purpose of the Study:
- To identify and characterize novel regulatory factors involved in B-cell isotype-switch recombination.
- To investigate the role of LPS-responsive factor 1 (LR1) in this process.
Main Methods:
- Nuclear extracts from primary murine B lymphocytes cultured with LPS were analyzed.
- DNA-binding assays were performed to identify and characterize LR1.
- Kinetic studies and binding site analysis were conducted.
Main Results:
- An inducible DNA-binding activity, termed LR1, was identified in LPS-stimulated B lymphocytes.
- LR1 binds to conserved sequences in murine immunoglobulin switch regions and the heavy-chain enhancer.
- LR1 activity is induced with kinetics parallel to isotype switching and depends on phosphorylation.
Conclusions:
- LR1 is a candidate regulator of isotype-switch recombination in B cells.
- Its induction and phosphorylation dependence suggest LR1 integrates kinase-dependent signaling pathways.
- LR1 may play a critical role in communicating cellular signals to the chromosome to regulate antibody class switching.
Abstract:
In nuclear extracts of primary murine B lymphocytes cultured with LPS we have identified an inducible DNA-binding activity that is a candidate regulator of isotype-switch recombination. This LPS-responsive factor, which we refer to as LR1, is induced in LPS-cultured primary cells with kinetics that parallel isotype-switch recombination. LR1 binds sequences from the S gamma 1, S gamma 3, and S alpha switch regions, as well as the heavy-chain enhancer, and these binding sites define a consensus that occurs in each of the murine switch regions. LR1 activity is present in pre-B and B-cell lines but absent from primary B cells that have not been cultured with mitogen and from highly differentiated B-cell lines. LR1-binding activity depends on phosphorylation and is lost following incubation of nuclear extracts with acid phosphatase. The LPS inducibility and phosphorylation dependence of LR1 activity suggest that this factor monitors kinase-dependent events in cell development and communicates them to the chromosome. The locations of its binding sites and the kinetics of its induction are consistent with a role for LR1 in regulation of isotype switching.
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